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Structures of Clostridium thermocellum CbhA fibronectin(III)-like modules
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 5.1 294 0.2 M CaCl2 and 20% (w/v) PEG 3350, pH 5.1, VAPOR DIFFUSION, temperature 294K
Crystal Properties Matthews coefficient Solvent content 2.61 52.96
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 46.905 α = 90 b = 58.087 β = 90 c = 78.842 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD Bruker Platinum 135 Helios mirrors 2009-09-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE BRUKER AXS MICROSTAR 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.72 25 99.9 9.13 23576 23576
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.72 1.81 100 0.6206 2.6 5.24 3291
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.72 23.94 22264 22264 1208 99.76 0.16959 0.16664 0.1763 0.22639 0.2365 RANDOM 16.365
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.01 -0.01 -0.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 29.601 r_dihedral_angle_3_deg 13.579 r_dihedral_angle_4_deg 12.572 r_dihedral_angle_1_deg 6.466 r_scangle_it 4.291 r_scbond_it 2.776 r_angle_refined_deg 1.792 r_mcangle_it 1.67 r_mcbond_it 1.079 r_angle_other_deg 0.927
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 29.601 r_dihedral_angle_3_deg 13.579 r_dihedral_angle_4_deg 12.572 r_dihedral_angle_1_deg 6.466 r_scangle_it 4.291 r_scbond_it 2.776 r_angle_refined_deg 1.792 r_mcangle_it 1.67 r_mcbond_it 1.079 r_angle_other_deg 0.927 r_mcbond_other 0.403 r_chiral_restr 0.122 r_bond_refined_d 0.023 r_gen_planes_refined 0.009 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1448 Nucleic Acid Atoms Solvent Atoms 501 Heterogen Atoms 5
Software Software Software Name Purpose PROTEUM PLUS data collection MOLREP phasing REFMAC refinement SAINT data reduction PROTEUM PLUS data scaling