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Human adipocyte lipid-binding protein FABP4 in complex with (S)-3-phenyl butyric acid
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 6.5 293 1.6 M sodium citrate, pH 6.5, VAPOR DIFFUSION, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.09 41.16
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 32.364 α = 90 b = 53.389 β = 90 c = 74.944 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2010-02-27 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL7-1 1.000 SSRL BL7-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.09 50 95.9 0.075 10.4 3.3 52856
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.09 1.13 84 0.286 3
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT 1.2 43.48 40515 2079 97.8 0.157 0.155 0.1596 0.19 0.1885 18
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.06 -0.11 1.16
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.646 r_dihedral_angle_4_deg 16.615 r_dihedral_angle_3_deg 14.78 r_scangle_it 6.221 r_dihedral_angle_1_deg 6.006 r_scbond_it 4.416 r_mcangle_it 3.221 r_mcbond_it 2.051 r_angle_refined_deg 1.995 r_rigid_bond_restr 1.632
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.646 r_dihedral_angle_4_deg 16.615 r_dihedral_angle_3_deg 14.78 r_scangle_it 6.221 r_dihedral_angle_1_deg 6.006 r_scbond_it 4.416 r_mcangle_it 3.221 r_mcbond_it 2.051 r_angle_refined_deg 1.995 r_rigid_bond_restr 1.632 r_angle_other_deg 0.945 r_mcbond_other 0.617 r_chiral_restr 0.121 r_bond_refined_d 0.02 r_gen_planes_refined 0.009 r_gen_planes_other 0.003 r_bond_other_d 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1063 Nucleic Acid Atoms Solvent Atoms 202 Heterogen Atoms 12
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling AMoRE phasing REFMAC refinement PDB_EXTRACT data extraction