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Mycobacterium tuberculosis kinase inhibitor homolog RV0577
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.75 291 1.1M NACITRATE, 4% BUTANOL, MES, PH 6.75, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K
Crystal Properties Matthews coefficient Solvent content 2.03 39.46
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 81.597 α = 90 b = 81.981 β = 90 c = 36.037 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210 2005-02-09 M SINGLE WAVELENGTH 2 1 x-ray M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.3.1 ALS 8.3.1 2 SYNCHROTRON ALS BEAMLINE 8.3.1 0.97949, 0.97965, 1.00801 ALS 8.3.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 1.75 20 99.7 0.073 0.073 23.125 7 25186 18.88
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1,2 1.75 1.81 98.9 0.56 0.56 2.04 5.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.75 20 25186 1230 99.7 0.178 0.176 0.1867 0.212 0.2198 RANDOM 22.874
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.31 0.55 -0.24
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.396 r_dihedral_angle_4_deg 14.667 r_dihedral_angle_3_deg 13.064 r_dihedral_angle_1_deg 6.132 r_scangle_it 2.96 r_scbond_it 2.106 r_angle_refined_deg 1.35 r_mcangle_it 1.306 r_mcbond_it 0.988 r_angle_other_deg 0.778
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.396 r_dihedral_angle_4_deg 14.667 r_dihedral_angle_3_deg 13.064 r_dihedral_angle_1_deg 6.132 r_scangle_it 2.96 r_scbond_it 2.106 r_angle_refined_deg 1.35 r_mcangle_it 1.306 r_mcbond_it 0.988 r_angle_other_deg 0.778 r_metal_ion_refined 0.532 r_symmetry_vdw_other 0.242 r_nbd_refined 0.207 r_symmetry_vdw_refined 0.207 r_xyhbond_nbd_refined 0.198 r_mcbond_other 0.196 r_nbd_other 0.184 r_nbtor_refined 0.177 r_symmetry_hbond_refined 0.129 r_chiral_restr 0.086 r_nbtor_other 0.086 r_bond_refined_d 0.01 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_xyhbond_nbd_other r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1850 Nucleic Acid Atoms Solvent Atoms 271 Heterogen Atoms 23
Software Software Software Name Purpose SOLVE phasing REFMAC refinement ADSC data collection HKL-2000 data scaling