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EthR from Mycobacterium tuberculosis in complex with compound BDM14950
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 293 0.1mM Mes pH6.5, 1.5M Ammonium Sulfate and 10% Glycerol , VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.38 48.28
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 121.3 α = 90 b = 121.3 β = 90 c = 33.56 γ = 90
Symmetry Space Group P 41 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE ENRAF-NONIUS FR591 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 18.7 97.8 20632 94223
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.9 2.02 96.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.9 18.7 19311 1041 97.8 0.19662 0.19382 0.1921 0.25072 0.248 RANDOM 29.398
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.03 0.03 -0.07
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.611 r_dihedral_angle_4_deg 16.429 r_dihedral_angle_3_deg 14.978 r_dihedral_angle_1_deg 5.305 r_scangle_it 3.931 r_scbond_it 2.604 r_mcangle_it 1.739 r_angle_refined_deg 1.426 r_mcbond_it 1.035 r_nbtor_refined 0.3
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.611 r_dihedral_angle_4_deg 16.429 r_dihedral_angle_3_deg 14.978 r_dihedral_angle_1_deg 5.305 r_scangle_it 3.931 r_scbond_it 2.604 r_mcangle_it 1.739 r_angle_refined_deg 1.426 r_mcbond_it 1.035 r_nbtor_refined 0.3 r_symmetry_vdw_refined 0.238 r_nbd_refined 0.219 r_symmetry_hbond_refined 0.203 r_xyhbond_nbd_refined 0.2 r_chiral_restr 0.094 r_bond_refined_d 0.015 r_gen_planes_refined 0.007
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1510 Nucleic Acid Atoms Solvent Atoms 215 Heterogen Atoms 36
Software Software Software Name Purpose MAR345dtb data collection CCP4 model building REFMAC refinement XDS data reduction XDS data scaling CCP4 phasing