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Crystal Structure of BlaC-K73A bound with Cefamandole
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7.5 298 0.1 M HEPES, 2 M NH4H2PO4, pH 7.5, Vapor diffusion, Sitting drop, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.26 45.66
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 49.804 α = 90 b = 67.915 β = 90 c = 75.524 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210 2010-06-30 SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X29A 1.000 NSLS X29A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.22 50 99.8 0.069 32.5 7.6 76776 76623 10.218
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.22 1.24 99.1 0.698 2.1 5.9 3769
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.22 40.16 76546 3848 99.77 0.1584 0.1573 0.1535 0.1785 0.1736 RANDOM 14.7059
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.05 0.08 -0.03
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.443 r_dihedral_angle_4_deg 22.026 r_dihedral_angle_3_deg 10.913 r_dihedral_angle_1_deg 6.01 r_scangle_it 4.298 r_scbond_it 2.763 r_mcangle_it 1.989 r_angle_refined_deg 1.971 r_mcbond_it 1.186 r_rigid_bond_restr 1.157
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.443 r_dihedral_angle_4_deg 22.026 r_dihedral_angle_3_deg 10.913 r_dihedral_angle_1_deg 6.01 r_scangle_it 4.298 r_scbond_it 2.763 r_mcangle_it 1.989 r_angle_refined_deg 1.971 r_mcbond_it 1.186 r_rigid_bond_restr 1.157 r_chiral_restr 0.177 r_gen_planes_refined 0.016 r_bond_refined_d 0.009
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1984 Nucleic Acid Atoms Solvent Atoms 237 Heterogen Atoms 160
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction CBASS data collection HKL-2000 data reduction HKL-2000 data scaling