☰ Navigation Tabs
Chronobacterium ammoniagenes ACPS-CoA complex
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 EVAPORATION 6.5 25% PEG MME 5K, 0.1 M MES, 200 mM ammonium sulfate, pH 6.5, EVAPORATION
Crystal Properties Matthews coefficient Solvent content 2.25 45.42
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 54.779 α = 80.88 b = 56.019 β = 76.23 c = 88.279 γ = 60.92
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 120 CCD ADSC QUANTUM 4 1999-06-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 1-BM-C 1.00 APS 1-BM-C
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.89 30.52 73 0.05 58.1 52264 52264
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.89 1.95 44.2 0.15 6.4 0.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.89 20 47784 2539 70.34 0.21451 0.21209 0.2308 0.25933 0.2662 RANDOM 24.913
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.02 0.42 -0.3 -0.92 -0.43 -0.22
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.954 r_dihedral_angle_4_deg 18.7 r_dihedral_angle_3_deg 17.99 r_dihedral_angle_1_deg 6.858 r_scangle_it 3.47 r_scbond_it 2.277 r_angle_refined_deg 2.036 r_mcangle_it 1.67 r_mcbond_it 1.324 r_angle_other_deg 1.293
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.954 r_dihedral_angle_4_deg 18.7 r_dihedral_angle_3_deg 17.99 r_dihedral_angle_1_deg 6.858 r_scangle_it 3.47 r_scbond_it 2.277 r_angle_refined_deg 2.036 r_mcangle_it 1.67 r_mcbond_it 1.324 r_angle_other_deg 1.293 r_symmetry_hbond_refined 0.372 r_symmetry_vdw_refined 0.339 r_chiral_restr 0.294 r_symmetry_vdw_other 0.289 r_nbd_refined 0.259 r_mcbond_other 0.249 r_xyhbond_nbd_refined 0.22 r_nbd_other 0.199 r_nbtor_other 0.091 r_bond_refined_d 0.015 r_gen_planes_refined 0.006 r_bond_other_d 0.002 r_gen_planes_other 0.001 r_nbtor_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6433 Nucleic Acid Atoms Solvent Atoms 229 Heterogen Atoms 162
Software Software Software Name Purpose REFMAC refinement CNS refinement ADSC data collection HKL-2000 data reduction SCALEPACK data scaling CNS phasing