☰ Navigation Tabs
Refinement of placental alkaline phosphatase complexed with nitrophenyl
Crystallization Crystal Properties Matthews coefficient Solvent content 2.57 52.14
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 89.022 α = 90 b = 113.894 β = 90 c = 106.594 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 1.9 70.19 35479 1902 87 0.137 0.135 0.1325 0.19 0.1844 RANDOM 21.94
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.05 1.04 -0.99
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.446 r_dihedral_angle_4_deg 15.126 r_dihedral_angle_3_deg 13.663 r_dihedral_angle_1_deg 5.949 r_scangle_it 3.449 r_scbond_it 2.266 r_mcangle_it 1.349 r_angle_refined_deg 1.247 r_mcbond_it 0.876 r_nbtor_refined 0.305
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.446 r_dihedral_angle_4_deg 15.126 r_dihedral_angle_3_deg 13.663 r_dihedral_angle_1_deg 5.949 r_scangle_it 3.449 r_scbond_it 2.266 r_mcangle_it 1.349 r_angle_refined_deg 1.247 r_mcbond_it 0.876 r_nbtor_refined 0.305 r_nbd_refined 0.208 r_symmetry_vdw_refined 0.196 r_symmetry_hbond_refined 0.162 r_xyhbond_nbd_refined 0.157 r_chiral_restr 0.083 r_metal_ion_refined 0.083 r_bond_refined_d 0.01 r_gen_planes_refined 0.004 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3691 Nucleic Acid Atoms Solvent Atoms 527 Heterogen Atoms 89
Software Software Software Name Purpose REFMAC refinement