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Crystallographic and Single Crystal Spectral Analysis of the Peroxidase Ferryl Intermediate
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6 277.2 10uL (350-400uM protein), 22% MPD, 50mM tris phoshate buffer pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277.2K
Crystal Properties Matthews coefficient Solvent content 2.66 59.96
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 107.244 α = 90 b = 74.832 β = 90 c = 51.007 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 65 CCD MARMOSAIC 325 mm CCD 2009-11-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL9-2 SSRL BL9-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.4 50 96 0.101 0.101 13.3 3.3 78834
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.4 1.42 91.6 0.451 0.451 2.9 3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION AB INITIO FREE R 1.4 50 74447 91.3 0.114 0.114 0.1372 RANDOM
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
Coordinate Error Structure Solution Method Refinement High Resolution Refinement Low Resolution 7 2206.94 2964
RMS Deviations Key Refinement Restraint Deviation s_approx_iso_adps 0.104 s_anti_bump_dis_restr 0.084 s_zero_chiral_vol 0.07 s_non_zero_chiral_vol 0.065 s_similar_adp_cmpnt 0.047 s_angle_d 0.031 s_from_restr_planes 0.0288 s_bond_d 0.02 s_rigid_bond_adp_cmpnt 0.004 s_similar_dist
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2356 Nucleic Acid Atoms Solvent Atoms 630 Heterogen Atoms 48
Software Software Software Name Purpose MOSFLM data reduction SHELX model building SHELXL-97 refinement HKL-2000 data scaling SHELX phasing