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C. parvum inosine monophosphate dehydrogenase bound by inhibitor C64
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 microbatch under oil 4.6 295 30% MPD, 100 mM sodium acetate pH 4.6, 20 mM calcium chloride, microbatch under oil, temperature 295K
Crystal Properties Matthews coefficient Solvent content 2.2 44.1
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 83.481 α = 90 b = 166.141 β = 105.14 c = 101.289 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2008-10-30 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.2.2 0.9194 ALS 8.2.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.8 100 100 65589 65589 1 1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.8 2.9 100 0.383 5.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.8 42.135 65589 61921 3303 99.13 0.22643 0.22427 0.2221 0.26627 0.2628 RANDOM 53.214
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -3.61 0.04 -0.42 4.06
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.895 r_dihedral_angle_3_deg 15.139 r_dihedral_angle_4_deg 12.64 r_dihedral_angle_1_deg 4.373 r_angle_refined_deg 0.998 r_scangle_it 0.556 r_mcangle_it 0.371 r_scbond_it 0.305 r_nbtor_refined 0.287 r_mcbond_it 0.207
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.895 r_dihedral_angle_3_deg 15.139 r_dihedral_angle_4_deg 12.64 r_dihedral_angle_1_deg 4.373 r_angle_refined_deg 0.998 r_scangle_it 0.556 r_mcangle_it 0.371 r_scbond_it 0.305 r_nbtor_refined 0.287 r_mcbond_it 0.207 r_nbd_refined 0.161 r_xyhbond_nbd_refined 0.105 r_symmetry_vdw_refined 0.096 r_chiral_restr 0.057 r_symmetry_hbond_refined 0.034 r_bond_refined_d 0.006 r_gen_planes_refined 0.002 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 18009 Nucleic Acid Atoms Solvent Atoms 208 Heterogen Atoms 263
Software Software Software Name Purpose ADSC data collection MOLREP phasing REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling