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Structure of a putative YscO homolog CT670 from Chlamydia trachomatis
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 5.6 294 0.2M ammonium dihydrogen phosphate, 20% PEG3350, 1% PEG4000, 1mM magnesium sulfate, and 25mM MES pH 5.6, VAPOR DIFFUSION, SITTING DROP, temperature 294.0K
Crystal Properties Matthews coefficient Solvent content 2.35 47.75
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 83.112 α = 90 b = 23.194 β = 107.48 c = 105.624 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 225 mm CCD Be Lenses/Diamond Laue Mono 2008-06-18 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 21-ID-F 0.97921,0.97942 APS 21-ID-F
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 50 99 0.067 14.5 5.9 13438
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.07 91.6 0.191 4.6 1231
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2 27.41 13431 653 98.24 0.242 0.24 0.285 RANDOM 24.037
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.264 r_dihedral_angle_3_deg 18.381 r_dihedral_angle_4_deg 17.247 r_scangle_it 5.008 r_dihedral_angle_1_deg 4.448 r_scbond_it 3.002 r_mcangle_it 1.556 r_angle_refined_deg 1.535 r_mcbond_it 0.839 r_chiral_restr 0.11
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.264 r_dihedral_angle_3_deg 18.381 r_dihedral_angle_4_deg 17.247 r_scangle_it 5.008 r_dihedral_angle_1_deg 4.448 r_scbond_it 3.002 r_mcangle_it 1.556 r_angle_refined_deg 1.535 r_mcbond_it 0.839 r_chiral_restr 0.11 r_bond_refined_d 0.016 r_gen_planes_refined 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1373 Nucleic Acid Atoms Solvent Atoms 51 Heterogen Atoms
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling SHARP phasing DM phasing REFMAC refinement PDB_EXTRACT data extraction Blu-Ice data collection HKL-2000 data reduction HKL-2000 data scaling