3JA5
Genome and RdRp structure within the capsid of no-transcribing cypovirus
ELECTRON MICROSCOPY
Sample |
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Bombyx mori cypovirus 1 |
Specimen Preparation | |
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Sample Aggregation State | PARTICLE |
Vitrification Instrument | FEI VITROBOT MARK IV |
Cryogen Name | ETHANE |
Sample Vitrification Details |
3D Reconstruction | |
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Reconstruction Method | SINGLE PARTICLE |
Number of Particles | 28000 |
Reported Resolution (Å) | 12 |
Resolution Method | FSC 0.143 CUT-OFF |
Other Details | (Single particle details: Symmetry-mismatch reconstruction of icosahedral with D3 symmetry imposed) (Single particle--Applied symmetry: D3) |
Refinement Type | |
Symmetry Type | POINT |
Point Symmetry | D3 |
Map-Model Fitting and Refinement | |||||
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Id | 1 | ||||
Refinement Space | |||||
Refinement Protocol | |||||
Refinement Target | |||||
Overall B Value | |||||
Fitting Procedure | |||||
Details |
Data Acquisition | |||||||||
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Detector Type | GATAN ULTRASCAN 4000 (4k x 4k) | ||||||||
Electron Dose (electrons/Å**2) |
Imaging Experiment | 1 |
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Date of Experiment | 2010-04-10 |
Temperature (Kelvin) | |
Microscope Model | FEI TITAN KRIOS |
Minimum Defocus (nm) | |
Maximum Defocus (nm) | |
Minimum Tilt Angle (degrees) | |
Maximum Tilt Angle (degrees) | |
Nominal CS | |
Imaging Mode | BRIGHT FIELD |
Specimen Holder Model | GATAN HELIUM |
Nominal Magnification | 75000 |
Calibrated Magnification | 125390 |
Source | FIELD EMISSION GUN |
Acceleration Voltage (kV) | 300 |
Imaging Details |
EM Software | ||
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Task | Software Package | Version |
RECONSTRUCTION | MRC |
Image Processing | ||||
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CTF Correction Type | CTF Correction Details | Number of Particles Selected | Particle Selection Details | |
Each particle |