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Vitrification carried out in ambient atmosphere. Ethane cooled by liquid nitrogen.
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
4184
Reported Resolution (Å)
11.1
Resolution Method
FSC 0.5 CUT-OFF
Other Details
Reconstruction computed from focal pairs. Pairs not summed for reconstruction calculation.
Refinement Type
Symmetry Type
POINT
Point Symmetry
I
Map-Model Fitting and Refinement
Id
1 (1FPT, 1FPT, 1FPT)
2 (1ASJ)
Refinement Space
REAL
REAL
Refinement Protocol
RIGID BODY FIT
RIGID BODY FIT
Refinement Target
Overall B Value
Fitting Procedure
Details
REFINEMENT PROTOCOL--Rigid Body DETAILS--Atomic coordinates for C3 Fab (Nature
Struct. Biol. 2, 232-243) (PDB entry 1FPT) were manually fitted using ...
REFINEMENT PROTOCOL--Rigid Body DETAILS--Atomic coordinates for C3 Fab (Nature
Struct. Biol. 2, 232-243) (PDB entry 1FPT) were manually fitted using UCSF
Chimera (Journal of Computational Chemistry 25, 1605-1612). A core-weighted,
rigid-body fitting algorithm implemented in CHARRM (J Struct Biol 141, 63-76)
was used to refine the fit.
REFINEMENT PROTOCOL--Rigid body DETAILS--The unmodified coordinates of PDB
entry 1ASJ were placed into the cryo-EM density. The BC loop of VP1 was th ...
REFINEMENT PROTOCOL--Rigid body DETAILS--The unmodified coordinates of PDB
entry 1ASJ were placed into the cryo-EM density. The BC loop of VP1 was then
modified based on the fitting (see primary citation for details).