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immature ribosomal small subunit from rimm gene deleted E.coli strain
Specimen Preparation
Sample Aggregation State
PARTICLE
Vitrification Instrument
FEI VITROBOT MARK IV
Cryogen Name
ETHANE
Sample Vitrification Details
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
30262
Reported Resolution (Å)
13.1
Resolution Method
FSC 0.5 CUT-OFF
Other Details
This is a classification volume (No. 3) using ML3D methods.
Refinement Type
Symmetry Type
POINT
Point Symmetry
C1
Map-Model Fitting and Refinement
Id
1 (3OFA)
Refinement Space
REAL
Refinement Protocol
FLEXIBLE FIT
Refinement Target
Cross-correlation
Overall B Value
Fitting Procedure
Details
REFINEMENT PROTOCOL--Initial local fitting was done using Chimera and then MDFF
was used for flexible fitting DETAILS--ref- Trabuco, L.G., Villa, E., ...
REFINEMENT PROTOCOL--Initial local fitting was done using Chimera and then MDFF
was used for flexible fitting DETAILS--ref- Trabuco, L.G., Villa, E., Mitra,
K., Frank, J. and Schulten, K. (2008) Flexible fitting of atomic structures
into electron microscopy maps using molecular dynamics. Structure, 16, 673-683