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Structure of the HPT domain of Sensor protein barA from Escherichia coli CFT073.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6.5 277 0.05M Calcium Chloride dihydrate, ).1M Bis Tris pH6.5, 30% PEG Monomethyl ether 550, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 1.86 33.82
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 24.316 α = 90 b = 60.359 β = 108.21 c = 37.156 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r 2009-08-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 0.97942 APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.4 50 99.3 0.094 10.5 5 19949 19949 -3 15.3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.4 1.42 100 0.414 4.9 1030
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.4 35.3 19928 19928 1012 99.2 0.143 0.143 0.141 0.14 0.181 0.1788 RANDOM 19.949
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.59 -0.04 0.94 -0.37
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.244 r_dihedral_angle_4_deg 24.226 r_dihedral_angle_3_deg 11.359 r_sphericity_free 5.819 r_dihedral_angle_1_deg 5.09 r_scangle_it 4.887 r_sphericity_bonded 3.28 r_scbond_it 3.088 r_mcangle_it 2.016 r_angle_refined_deg 1.493
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.244 r_dihedral_angle_4_deg 24.226 r_dihedral_angle_3_deg 11.359 r_sphericity_free 5.819 r_dihedral_angle_1_deg 5.09 r_scangle_it 4.887 r_sphericity_bonded 3.28 r_scbond_it 3.088 r_mcangle_it 2.016 r_angle_refined_deg 1.493 r_rigid_bond_restr 1.371 r_mcbond_it 1.256 r_angle_other_deg 0.931 r_mcbond_other 0.602 r_chiral_restr 0.077 r_bond_refined_d 0.016 r_gen_planes_refined 0.006 r_bond_other_d 0.002 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 960 Nucleic Acid Atoms Solvent Atoms 141 Heterogen Atoms 15
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling MLPHARE phasing DM phasing REFMAC refinement PDB_EXTRACT data extraction SBC-Collect data collection HKL-3000 data reduction HKL-3000 data scaling HKL-3000 phasing SHELXD phasing SHELXE model building SOLVE phasing RESOLVE phasing ARP/wARP model building CCP4 phasing O model building Coot model building