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Propionyl-CoA Carboxylase Beta Subunit, D422A
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 sitting drop vapor diffusion 7 298 Bis-Tris,(NH4)SO4, PEG 3350, pH 7.0, sitting drop vapor diffusion, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.66 53.76
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 87.06 α = 90 b = 183.328 β = 90 c = 228.706 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r Si 2005-02-27 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 5.0.2 0.99 ALS 5.0.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.5 50 11.2 5.7 46071
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 3.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 3.5 50 46011 2294 94.4 0.194 0.19 0.2994 0.269 0.3122 RANDOM 2.033
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 3.05 -1.6 -1.44
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.092 r_dihedral_angle_4_deg 23.432 r_dihedral_angle_3_deg 23.089 r_dihedral_angle_1_deg 8.636 r_angle_refined_deg 3.95 r_symmetry_hbond_refined 0.418 r_nbtor_refined 0.38 r_symmetry_vdw_refined 0.378 r_nbd_refined 0.34 r_xyhbond_nbd_refined 0.267
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.092 r_dihedral_angle_4_deg 23.432 r_dihedral_angle_3_deg 23.089 r_dihedral_angle_1_deg 8.636 r_angle_refined_deg 3.95 r_symmetry_hbond_refined 0.418 r_nbtor_refined 0.38 r_symmetry_vdw_refined 0.378 r_nbd_refined 0.34 r_xyhbond_nbd_refined 0.267 r_chiral_restr 0.215 r_mcangle_it 0.183 r_scangle_it 0.176 r_mcbond_it 0.121 r_scbond_it 0.112 r_bond_refined_d 0.059 r_gen_planes_refined 0.014
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 23700 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement CNS refinement PDB_EXTRACT data extraction HKL-2000 data collection HKL-2000 data reduction HKL-2000 data scaling CNS phasing