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Hepatitis C virus polymerase NS5B with thiazine inhibitor 2
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 4.9 293 50 mM Na Citrate pH 4.9, 26% PEG 4000, 7.5% glycerol, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.29 46.28
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 86.855 α = 90 b = 106.417 β = 90 c = 127.195 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210 2005-11-04 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 5.0.2 1.0000 ALS 5.0.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.1 50 93.7 0.124 12.1 4.6 69435 65051 26.7
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.1 2.18 87.7 0.699 1.82 3.2 6073
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 2.1 49.09 61529 3255 93.3 0.19535 0.19268 0.1962 0.24571 0.2447 RANDOM 19.221
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.04 1.78 -1.73
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.965 r_dihedral_angle_3_deg 14.944 r_dihedral_angle_4_deg 13.691 r_dihedral_angle_1_deg 5.995 r_scangle_it 2.495 r_scbond_it 1.629 r_angle_refined_deg 1.338 r_mcangle_it 1.094 r_angle_other_deg 0.956 r_mcbond_it 0.681
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.965 r_dihedral_angle_3_deg 14.944 r_dihedral_angle_4_deg 13.691 r_dihedral_angle_1_deg 5.995 r_scangle_it 2.495 r_scbond_it 1.629 r_angle_refined_deg 1.338 r_mcangle_it 1.094 r_angle_other_deg 0.956 r_mcbond_it 0.681 r_symmetry_hbond_refined 0.319 r_symmetry_vdw_refined 0.258 r_symmetry_vdw_other 0.258 r_nbd_refined 0.2 r_nbd_other 0.188 r_nbtor_refined 0.173 r_xyhbond_nbd_refined 0.162 r_mcbond_other 0.139 r_nbtor_other 0.085 r_chiral_restr 0.075 r_bond_refined_d 0.012 r_gen_planes_refined 0.004 r_bond_other_d 0.002 r_gen_planes_other 0.001 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8768 Nucleic Acid Atoms Solvent Atoms 738 Heterogen Atoms 76
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling REFMAC phasing