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Promiscuous Substrate Recognition in Folding and Assembly Activities of the Trigger Factor Chaperone
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5.5 298 5-10 % PEG4000, 100 NaOAc, pH 5.5, vapor diffusion, hanging drop, temperature 298K
Crystal Properties Matthews coefficient Solvent content 3.19 61.43
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 94.162 α = 90 b = 94.162 β = 90 c = 193.072 γ = 90
Symmetry Space Group P 43 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 monochromator 2005-03-21 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X4A 0.9792,0.9794,0.9687 NSLS X4A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.3 50 98.4 0.057 21.369 3.3 13240
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 3.3 3.42 99.9 0.369 3.4 2467
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 3.4 12 11963 620 100 0.261 0.257 0.2544 0.329 0.3193 RANDOM 49.985
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 44.821 r_dihedral_angle_4_deg 21.017 r_dihedral_angle_3_deg 18.116 r_dihedral_angle_1_deg 4.909 r_scangle_it 2.323 r_mcangle_it 1.409 r_scbond_it 1.35 r_angle_refined_deg 1.321 r_mcbond_it 0.833 r_nbtor_refined 0.317
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 44.821 r_dihedral_angle_4_deg 21.017 r_dihedral_angle_3_deg 18.116 r_dihedral_angle_1_deg 4.909 r_scangle_it 2.323 r_mcangle_it 1.409 r_scbond_it 1.35 r_angle_refined_deg 1.321 r_mcbond_it 0.833 r_nbtor_refined 0.317 r_nbd_refined 0.26 r_symmetry_vdw_refined 0.24 r_symmetry_hbond_refined 0.176 r_xyhbond_nbd_refined 0.143 r_chiral_restr 0.083 r_bond_refined_d 0.014 r_gen_planes_refined 0.004
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4610 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling SOLVE phasing RESOLVE phasing REFMAC refinement PDB_EXTRACT data extraction ADSC data collection