☰ Navigation Tabs
Crystal structure of putative NADPH:quinone reductase from bacillus thuringiensis
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7.5 298 0.1M Sodium Hepes pH 7.5, 30% PEG 400, 0.2M MgCl2, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.65 53.59
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 68.599 α = 90 b = 94.772 β = 112.97 c = 67.573 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2008-12-09 SAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X29A 0.979 NSLS X29A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.76 50 98.3 0.069 17.826 3.1 76483
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.76 1.82 95.5 0.367 2.8 7462
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.76 50 38977 1955 98.56 0.2 0.199 0.2003 0.234 0.237 RANDOM 30.32
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.82 0.02 -0.94 -1.87
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.557 r_dihedral_angle_4_deg 21.401 r_dihedral_angle_3_deg 14.236 r_dihedral_angle_1_deg 5.647 r_scangle_it 4.24 r_scbond_it 2.553 r_mcangle_it 1.686 r_angle_refined_deg 1.447 r_mcbond_it 0.933 r_chiral_restr 0.104
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.557 r_dihedral_angle_4_deg 21.401 r_dihedral_angle_3_deg 14.236 r_dihedral_angle_1_deg 5.647 r_scangle_it 4.24 r_scbond_it 2.553 r_mcangle_it 1.686 r_angle_refined_deg 1.447 r_mcbond_it 0.933 r_chiral_restr 0.104 r_bond_refined_d 0.015 r_gen_planes_refined 0.007
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2639 Nucleic Acid Atoms Solvent Atoms 147 Heterogen Atoms
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling REFMAC refinement PDB_EXTRACT data extraction CBASS data collection HKL-2000 data reduction SHELXD phasing SHELXE model building CCP4 phasing