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EthR from Mycobacterium tuberculosis in complex with compound BDM14500
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 293 0.17 M ammonium sulfate, 0.085 M Na-cacodylate (pH 6.5), 15% glycerol, and 25% polyethylene glycol 8000, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.21 44.38
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 121.23 α = 90 b = 121.23 β = 90 c = 33.68 γ = 90
Symmetry Space Group P 41 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-2 ESRF ID14-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.85 19.42 100 20428 20428
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.85 1.898 100
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 1.85 19.42 20428 20428 1075 100 0.211 0.211 0.20766 0.27666 0.2765 RANDOM 21.567
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.11 0.11 -0.21
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.339 r_dihedral_angle_3_deg 16.247 r_dihedral_angle_4_deg 16.071 r_dihedral_angle_1_deg 5.407 r_sphericity_free 5.181 r_scangle_it 3.398 r_sphericity_bonded 3.096 r_scbond_it 2.398 r_mcangle_it 1.78 r_angle_refined_deg 1.586
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.339 r_dihedral_angle_3_deg 16.247 r_dihedral_angle_4_deg 16.071 r_dihedral_angle_1_deg 5.407 r_sphericity_free 5.181 r_scangle_it 3.398 r_sphericity_bonded 3.096 r_scbond_it 2.398 r_mcangle_it 1.78 r_angle_refined_deg 1.586 r_rigid_bond_restr 1.584 r_mcbond_it 1.178 r_symmetry_hbond_refined 0.357 r_xyhbond_nbd_refined 0.333 r_nbtor_refined 0.3 r_nbd_refined 0.215 r_symmetry_vdw_refined 0.184 r_chiral_restr 0.108 r_bond_refined_d 0.015 r_gen_planes_refined 0.007
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1510 Nucleic Acid Atoms Solvent Atoms 165 Heterogen Atoms 23
Software Software Software Name Purpose REFMAC refinement XDS data reduction XDS data scaling