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Crystal Structure of CheY triple mutant F14E, N59R, E89H complexed with BeF3- and Mn2+
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8.4 298 Tris buffer, Ammonium Sulfate, Glycerol, BeCl2, NaF, MnCl2, pH 8.4, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 4.13 70.21
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 53.564 α = 90 b = 53.408 β = 90 c = 161.839 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray IMAGE PLATE RIGAKU RAXIS IV++ 2007-10-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RUH3R 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.01 30.97 99.7 0.079 24.951 4.7 31825
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.01 2.08 99.7 0.427 4.6 3125
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 2.01 30.97 31770 1607 99.65 0.18 0.178 0.183 0.21 0.21 RANDOM 28.524
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.56 0.31 -0.87
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.963 r_dihedral_angle_3_deg 14.166 r_dihedral_angle_4_deg 8.865 r_dihedral_angle_1_deg 6.046 r_scangle_it 3.405 r_scbond_it 2.275 r_angle_refined_deg 1.546 r_mcangle_it 1.204 r_mcbond_it 1.035 r_angle_other_deg 1.022
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.963 r_dihedral_angle_3_deg 14.166 r_dihedral_angle_4_deg 8.865 r_dihedral_angle_1_deg 6.046 r_scangle_it 3.405 r_scbond_it 2.275 r_angle_refined_deg 1.546 r_mcangle_it 1.204 r_mcbond_it 1.035 r_angle_other_deg 1.022 r_symmetry_vdw_other 0.276 r_nbd_refined 0.214 r_symmetry_hbond_refined 0.204 r_nbd_other 0.196 r_mcbond_other 0.196 r_nbtor_refined 0.169 r_xyhbond_nbd_refined 0.166 r_chiral_restr 0.104 r_symmetry_vdw_refined 0.095 r_nbtor_other 0.087 r_bond_refined_d 0.015 r_gen_planes_refined 0.005 r_bond_other_d 0.002 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1962 Nucleic Acid Atoms Solvent Atoms 348 Heterogen Atoms 55
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling REFMAC refinement PDB_EXTRACT data extraction