☰ Navigation Tabs
Crystal structure of a chorismate mutase/shikimate 5-dehydrogenase fusion protein from Clostridium acetobutylicum
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 6 294 100mM Bis-Tris pH 6.0, 31% PEG 3350, 200mM ammonium sulfate, vapor diffusion, temperature 294K
Crystal Properties Matthews coefficient Solvent content 2.28 46.05
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 65.132 α = 90 b = 135.336 β = 102.14 c = 67.14 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MAR CCD 165 mm 2008-11-14 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 31-ID 0.97958 APS 31-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.1 67.729 94.4 0.083 0.083 10.9 5.1 66193 62486 38.1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.1 2.21 92.3 0.407 0.407 3.1 5.1 8818
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.1 20 66079 62385 3154 94.41 0.236 0.233 0.2305 0.299 0.2881 RANDOM 50.548
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.01 0.64 0.56 -0.29
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.907 r_dihedral_angle_3_deg 18.704 r_dihedral_angle_4_deg 17.877 r_dihedral_angle_1_deg 6.327 r_scangle_it 5.051 r_scbond_it 3.124 r_mcangle_it 1.964 r_angle_refined_deg 1.878 r_mcbond_it 1.115 r_chiral_restr 0.123
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.907 r_dihedral_angle_3_deg 18.704 r_dihedral_angle_4_deg 17.877 r_dihedral_angle_1_deg 6.327 r_scangle_it 5.051 r_scbond_it 3.124 r_mcangle_it 1.964 r_angle_refined_deg 1.878 r_mcbond_it 1.115 r_chiral_restr 0.123 r_bond_refined_d 0.02 r_gen_planes_refined 0.009
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8391 Nucleic Acid Atoms Solvent Atoms 153 Heterogen Atoms 45
Software Software Software Name Purpose SCALA data scaling REFMAC refinement PDB_EXTRACT data extraction MAR345 data collection MOSFLM data reduction SHELXCD phasing SHELXE model building