☰ Navigation Tabs
Crystal Structure of soluble domain of CA4 in complex with small molecule.
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model Other Unpublished in-house CA4 crystal structure.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 4.5 286 22% PEG 3350, 0.1M Na Acetate, 0.2M Ammonium sulfate, 5mM DTT, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 286K
Crystal Properties Matthews coefficient Solvent content 2.53 51.3
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 64.886 α = 90 b = 123.83 β = 90 c = 152.723 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 95 CCD ADSC QUANTUM 315 2005-01-21 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 5.0.2 1.00 ALS 5.0.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 49.45 90.4 0.087 14.1 3.4 75487 1 2 34.1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2 2.07 88.6 0.47 2.21 3.1 7296
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT Unpublished in-house CA4 crystal structure. 2 49.45 1 71615 71615 3801 90.21 0.21415 0.21154 0.2108 0.26356 0.2611 RANDOM 22.195
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.29 0.3 -0.59
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.859 r_dihedral_angle_3_deg 16.465 r_dihedral_angle_4_deg 14.703 r_dihedral_angle_1_deg 7.553 r_scangle_it 5.47 r_scbond_it 3.556 r_mcangle_it 2.12 r_angle_refined_deg 2.092 r_mcbond_it 1.277 r_chiral_restr 0.147
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.859 r_dihedral_angle_3_deg 16.465 r_dihedral_angle_4_deg 14.703 r_dihedral_angle_1_deg 7.553 r_scangle_it 5.47 r_scbond_it 3.556 r_mcangle_it 2.12 r_angle_refined_deg 2.092 r_mcbond_it 1.277 r_chiral_restr 0.147 r_bond_refined_d 0.025 r_gen_planes_refined 0.011 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7952 Nucleic Acid Atoms Solvent Atoms 295 Heterogen Atoms 104
Software Software Software Name Purpose HKL-2000 data collection REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling REFMAC phasing