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Crystal structure of the Q9I3C8_PSEAE protein from Pseudomonas aeruginosa. Northeast Structural Genomics Consortium target PaR319a.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6 291 20% PEG 8000, 0.1M magnesium acetate, 0.1M MES, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Crystal Properties Matthews coefficient Solvent content 2.16 43.11
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 65.626 α = 90 b = 72.988 β = 90 c = 120.741 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MAR CCD 165 mm MIRRORS 2008-10-12 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X4C NSLS X4C
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 50 99.4 0.052 42.2 7.5 56850 56509
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.2 2.28 99.9 0.266 11 6.2 5708
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.2 50 27155 1450 94.88 0.2187 0.21713 0.2149 0.24915 0.2472 RANDOM 32.81
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.79 0.57 -1.36
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.358 r_dihedral_angle_4_deg 19.488 r_dihedral_angle_3_deg 17.393 r_dihedral_angle_1_deg 7.325 r_scangle_it 6.288 r_scbond_it 4.663 r_mcangle_it 2.929 r_mcbond_it 2.417 r_angle_refined_deg 0.906 r_nbtor_refined 0.322
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.358 r_dihedral_angle_4_deg 19.488 r_dihedral_angle_3_deg 17.393 r_dihedral_angle_1_deg 7.325 r_scangle_it 6.288 r_scbond_it 4.663 r_mcangle_it 2.929 r_mcbond_it 2.417 r_angle_refined_deg 0.906 r_nbtor_refined 0.322 r_nbd_refined 0.261 r_symmetry_vdw_refined 0.217 r_xyhbond_nbd_refined 0.168 r_symmetry_hbond_refined 0.151 r_chiral_restr 0.075 r_gen_planes_refined 0.017 r_bond_refined_d 0.007 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4142 Nucleic Acid Atoms Solvent Atoms 245 Heterogen Atoms 2
Software Software Software Name Purpose HKL-2000 data collection SHELXDE phasing RESOLVE model building REFMAC refinement HKL-2000 data reduction SCALEPACK data scaling RESOLVE phasing