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Structure of Influenza Haemagglutinin in complex with an inhibitor of membrane fusion
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8 293 Ammonium citratre, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 160.465 α = 90 b = 160.464 β = 90 c = 176.548 γ = 90
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2008-09-09 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I03 0.97565 Diamond I03
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.8 129 99.8 104202 103890
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.8 2.93 100
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.8 19.93 104202 103890 5462 99.7 0.19709 0.19656 0.21711 0.2237 RANDOM 57.576
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.19 0.19 -0.39
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.345 r_dihedral_angle_4_deg 19.858 r_dihedral_angle_3_deg 16.239 r_dihedral_angle_1_deg 5.898 r_scangle_it 4.37 r_scbond_it 2.956 r_mcangle_it 1.85 r_angle_refined_deg 1.473 r_mcbond_it 1.345 r_symmetry_hbond_refined 0.336
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.345 r_dihedral_angle_4_deg 19.858 r_dihedral_angle_3_deg 16.239 r_dihedral_angle_1_deg 5.898 r_scangle_it 4.37 r_scbond_it 2.956 r_mcangle_it 1.85 r_angle_refined_deg 1.473 r_mcbond_it 1.345 r_symmetry_hbond_refined 0.336 r_nbtor_refined 0.321 r_nbd_refined 0.25 r_symmetry_vdw_refined 0.247 r_xyhbond_nbd_refined 0.177 r_chiral_restr 0.097 r_bond_refined_d 0.014 r_gen_planes_refined 0.005 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 11544 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms 36
Software Software Software Name Purpose ADSC data collection AMoRE phasing REFMAC refinement DENZO data reduction SCALEPACK data scaling