X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION7.527717 % (w/v) polyethyleneglycol-6000, 50 mM KCl, 100 mM HEPES-KOH pH 7.5, vapor diffusion, temperature 277K
Crystal Properties
Matthews coefficientSolvent content
2.9358.01

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 129.84α = 90
b = 141.649β = 90
c = 150.516γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCH2007-05-03MMAD
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSLS BEAMLINE X10SA0.9719, 0.9792, 0.9795SLSX10SA

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.35103.14299.90.0580.0589.83.711568450.11
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.352.4899.70.4720.4721.63.416664

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADTHROUGHOUT2.352011542457971000.2130.210.262RANDOM34.668
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.15-1.912.06
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.362
r_dihedral_angle_4_deg20.969
r_dihedral_angle_3_deg18.562
r_dihedral_angle_1_deg6.119
r_scangle_it2.283
r_scbond_it1.469
r_angle_refined_deg1.43
r_mcangle_it0.903
r_mcbond_it0.563
r_nbtor_refined0.298
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.362
r_dihedral_angle_4_deg20.969
r_dihedral_angle_3_deg18.562
r_dihedral_angle_1_deg6.119
r_scangle_it2.283
r_scbond_it1.469
r_angle_refined_deg1.43
r_mcangle_it0.903
r_mcbond_it0.563
r_nbtor_refined0.298
r_symmetry_vdw_refined0.206
r_nbd_refined0.203
r_symmetry_hbond_refined0.187
r_xyhbond_nbd_refined0.136
r_chiral_restr0.105
r_metal_ion_refined0.052
r_bond_refined_d0.012
r_gen_planes_refined0.004
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms15327
Nucleic Acid Atoms
Solvent Atoms428
Heterogen Atoms70

Software

Software
Software NamePurpose
MOSFLMdata reduction
SCALAdata scaling
SHELXphasing
RESOLVEphasing
REFMACrefinement
PDB_EXTRACTdata extraction
SHELXDphasing