☰ Navigation Tabs
Atomic Resolution Structures of Escherichia coli and Bacillis anthracis Malate Synthase A: Comparison with Isoform G and Implications for Structure Based Drug Design
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 298 0.1M PIPES pH 6.5, 0.1M ammonium sulfate, 27% PEG 8K. Data collected 3 months after set-up, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.3 46.61
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 75.202 α = 90 b = 71.475 β = 90.06 c = 103.261 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2007-05-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 5.0.2 1.00 ALS 5.0.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.4 30 97.1 229489 1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.4 1.45 94.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.4 25.01 198569 10530 97.53 0.17144 0.16994 0.1756 0.19981 0.2046 RANDOM 15.284
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.06 0.01 -0.11 0.17
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.981 r_dihedral_angle_4_deg 15.48 r_dihedral_angle_3_deg 12.657 r_sphericity_free 5.483 r_dihedral_angle_1_deg 5.415 r_sphericity_bonded 3.059 r_scangle_it 2.946 r_scbond_it 2.116 r_mcangle_it 1.513 r_angle_refined_deg 1.224
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.981 r_dihedral_angle_4_deg 15.48 r_dihedral_angle_3_deg 12.657 r_sphericity_free 5.483 r_dihedral_angle_1_deg 5.415 r_sphericity_bonded 3.059 r_scangle_it 2.946 r_scbond_it 2.116 r_mcangle_it 1.513 r_angle_refined_deg 1.224 r_mcbond_it 1.056 r_rigid_bond_restr 0.953 r_angle_other_deg 0.909 r_mcbond_other 0.489 r_symmetry_vdw_other 0.224 r_nbd_refined 0.214 r_nbd_other 0.196 r_nbtor_refined 0.182 r_symmetry_vdw_refined 0.132 r_symmetry_hbond_refined 0.132 r_xyhbond_nbd_refined 0.13 r_nbtor_other 0.084 r_chiral_restr 0.074 r_bond_refined_d 0.01 r_gen_planes_refined 0.006 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8430 Nucleic Acid Atoms Solvent Atoms 1156 Heterogen Atoms 77
Software Software Software Name Purpose REFMAC refinement ADSC data collection HKL-2000 data reduction HKL-2000 data scaling MOLREP phasing