☰ Navigation Tabs
Crystal structure of Hox11L1 homeodomain
Crystallization Crystal Properties Matthews coefficient Solvent content 2.97 58.56
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 73.06 α = 90 b = 33.17 β = 102.12 c = 34.43 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON PHOTON FACTORY BEAMLINE AR-NW12A Photon Factory AR-NW12A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.54 20 11716
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.54 19.34 11148 567 96.17 0.2009 0.19982 0.1914 0.22282 0.2123 RANDOM 26.966
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.07 -0.18 0.37 -0.37
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 18.306 r_dihedral_angle_4_deg 16.186 r_dihedral_angle_3_deg 11.004 r_scangle_it 4.041 r_dihedral_angle_1_deg 3.488 r_scbond_it 2.478 r_mcangle_it 1.566 r_angle_refined_deg 1.236 r_mcbond_it 0.823 r_xyhbond_nbd_refined 0.366
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 18.306 r_dihedral_angle_4_deg 16.186 r_dihedral_angle_3_deg 11.004 r_scangle_it 4.041 r_dihedral_angle_1_deg 3.488 r_scbond_it 2.478 r_mcangle_it 1.566 r_angle_refined_deg 1.236 r_mcbond_it 0.823 r_xyhbond_nbd_refined 0.366 r_nbtor_refined 0.302 r_symmetry_vdw_refined 0.295 r_symmetry_hbond_refined 0.266 r_nbd_refined 0.199 r_chiral_restr 0.073 r_bond_refined_d 0.012 r_gen_planes_refined 0.007 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 459 Nucleic Acid Atoms Solvent Atoms 106 Heterogen Atoms 11
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction XSCALE data scaling