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Crystal structure of TT0207 from Thermus thermophilus HB8
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 9 295 20w/v(%) PEG550 MME, 0.1M Bicine, 0.1M Na Chlor, pH9.0, Oil microbatch, temperature 295K
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 61.318 α = 90 b = 86.456 β = 90 c = 126.343 γ = 90
Symmetry Space Group I 2 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE RIGAKU RAXIS V Mirror 2005-07-14 M SINGLE WAVELENGTH 2 2 x-ray 100 IMAGE PLATE RIGAKU RAXIS V Mirror 2005-07-14 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SPRING-8 BEAMLINE BL26B2 1 SPring-8 BL26B2 2 SYNCHROTRON SPRING-8 BEAMLINE BL26B2 0.97912, 0.97944, 0.97700, 0.98400 SPring-8 BL26B2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 2 40 100 0.133 0.123 5 6.4 23057 23057 13.3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2 2.07 100 0.225 0.208 3.62 6.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2 35.68 23057 23057 1165 100 0.211 0.211 0.2132 0.235 0.2358 RANDOM 32.1
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -8.38 -2.46 10.84
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 23.2 c_scangle_it 3.46 c_mcangle_it 2.39 c_scbond_it 2.23 c_mcbond_it 1.52 c_angle_deg 1.3 c_improper_angle_d 0.78 c_bond_d 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1974 Nucleic Acid Atoms Solvent Atoms 216 Heterogen Atoms 26
Software Software Software Name Purpose CNS refinement BSS data collection HKL-2000 data reduction SCALEPACK data scaling SOLVE phasing