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Human Annexin V with incorporated Methionine analogue Azidohomoalanine
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1ANX PDB ENTRY 1ANX
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 8.5 2.0 M AMMONIUM SULFATE, 20 MM CALCIUM CHLORIDE, 0.1 M TRIS/HCL, PH 8.5
Crystal Properties Matthews coefficient Solvent content 2.2 43.5
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 152.708 α = 90 b = 152.708 β = 90 c = 33.603 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M DYNAMICALLY BENDABLE MIRROR 2008-05-03 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X10SA SLS X10SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.8 20 99.7 0.1 5.7 2.6 7169 68.1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.8 2.95 100 0.33 2.3 2.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 1ANX 2.8 19.09 7158 377 99.8 0.274 0.274 0.268 0.296 0.2966 RANDOM 61.4
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -16.73 -16.73 33.45
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 22.2 c_improper_angle_d 1.44 c_angle_deg 1.1 c_mcangle_it 0.86 c_scangle_it 0.53 c_mcbond_it 0.46 c_scbond_it 0.27 c_bond_d 0.007 c_bond_d_na c_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 22.2 c_improper_angle_d 1.44 c_angle_deg 1.1 c_mcangle_it 0.86 c_scangle_it 0.53 c_mcbond_it 0.46 c_scbond_it 0.27 c_bond_d 0.007 c_bond_d_na c_bond_d_prot c_angle_d c_angle_d_na c_angle_d_prot c_angle_deg_na c_angle_deg_prot c_dihedral_angle_d_na c_dihedral_angle_d_prot c_improper_angle_d_na c_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2512 Nucleic Acid Atoms Solvent Atoms 109 Heterogen Atoms 14
Software Software Software Name Purpose CNS refinement MOSFLM data reduction SCALA data scaling PHASER phasing