☰ Navigation Tabs
Staphylococcus aureus S1:DHFR
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7 2.1 M MALIC ACID PH 7.0
Crystal Properties Matthews coefficient Solvent content 2.73 54.59
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 54.09 α = 90 b = 71.637 β = 90.04 c = 54.132 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 273 CCD ADSC CCD SI 2007-06-20 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 17-BM APS 17-BM
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.4 50 99.9 0.1 13 3.7 17017
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.4 2.49 99.9 0.49 2.5 3.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.35 71.61 16136 861 97.7 0.179 0.175 0.1584 0.246 0.2111 RANDOM 25.2
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.68 0.11 -1.23 0.55
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.818 r_dihedral_angle_4_deg 24.736 r_dihedral_angle_3_deg 18.775 r_dihedral_angle_1_deg 10.173 r_scangle_it 8.665 r_scbond_it 6.522 r_mcangle_it 4.065 r_mcbond_it 2.833 r_angle_refined_deg 2.4 r_symmetry_vdw_refined 0.354
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.818 r_dihedral_angle_4_deg 24.736 r_dihedral_angle_3_deg 18.775 r_dihedral_angle_1_deg 10.173 r_scangle_it 8.665 r_scbond_it 6.522 r_mcangle_it 4.065 r_mcbond_it 2.833 r_angle_refined_deg 2.4 r_symmetry_vdw_refined 0.354 r_nbtor_refined 0.322 r_nbd_refined 0.264 r_chiral_restr 0.206 r_xyhbond_nbd_refined 0.2 r_symmetry_hbond_refined 0.157 r_bond_refined_d 0.025 r_gen_planes_refined 0.009 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2570 Nucleic Acid Atoms Solvent Atoms 136 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction SCALEPACK data scaling AMoRE phasing