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CBM35 from Cellvibrio japonicus Abf62
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.9 0.4M SODIUM THIOCYANATE, 20% PEG3350, pH 6.9
Crystal Properties Matthews coefficient Solvent content 2.06 40.2
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 28.216 α = 71.61 b = 46.135 β = 89.78 c = 49.006 γ = 82.19
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 80 IMAGE PLATE RIGAKU IMAGE PLATE MIRRORS M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU MICROMAX-007
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 23.9 94.1 0.12 10.6 1.7 16341 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.9 1.95 90.8 0.29 2.4 1.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.9 23.88 16341 889 94.1 0.141 0.137 0.218 0.2242 RANDOM 10.37
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.06 -0.01 0.08 0.03 -0.12
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.459 r_dihedral_angle_4_deg 17.181 r_dihedral_angle_3_deg 12.139 r_dihedral_angle_1_deg 7.321 r_scangle_it 3.529 r_scbond_it 2.405 r_angle_refined_deg 1.562 r_mcangle_it 1.466 r_mcbond_it 0.865 r_nbtor_refined 0.304
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.459 r_dihedral_angle_4_deg 17.181 r_dihedral_angle_3_deg 12.139 r_dihedral_angle_1_deg 7.321 r_scangle_it 3.529 r_scbond_it 2.405 r_angle_refined_deg 1.562 r_mcangle_it 1.466 r_mcbond_it 0.865 r_nbtor_refined 0.304 r_nbd_refined 0.206 r_symmetry_vdw_refined 0.187 r_xyhbond_nbd_refined 0.151 r_symmetry_hbond_refined 0.137 r_chiral_restr 0.116 r_bond_refined_d 0.017 r_gen_planes_refined 0.007 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1959 Nucleic Acid Atoms Solvent Atoms 423 Heterogen Atoms 4
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling MOLREP phasing