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Cohesin module from Clostridium perfringens ATCC13124 family 33 glycoside hydrolase.
Crystallization Crystal Properties Matthews coefficient Solvent content 1.89 40.33
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 38.088 α = 90 b = 38.088 β = 90 c = 174.851 γ = 90
Symmetry Space Group P 43 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 113 IMAGE PLATE RIGAKU RAXIS-IV OSMIC BLUE M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU MICROMAX-002
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.7 43.73 93.8 0.05 12.9 3.8 13479 2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER THROUGHOUT NONE 1.7 43.73 13479 713 93.8 0.217 0.214 0.2198 0.258 0.2623 RANDOM 17.8
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.21 0.21 -0.42
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.012 r_dihedral_angle_4_deg 26.52 r_dihedral_angle_3_deg 14.084 r_dihedral_angle_1_deg 7.573 r_scangle_it 3.416 r_scbond_it 2.762 r_angle_refined_deg 1.881 r_mcangle_it 1.567 r_mcbond_it 1.386 r_angle_other_deg 0.978
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.012 r_dihedral_angle_4_deg 26.52 r_dihedral_angle_3_deg 14.084 r_dihedral_angle_1_deg 7.573 r_scangle_it 3.416 r_scbond_it 2.762 r_angle_refined_deg 1.881 r_mcangle_it 1.567 r_mcbond_it 1.386 r_angle_other_deg 0.978 r_symmetry_vdw_refined 0.364 r_xyhbond_nbd_refined 0.207 r_nbd_refined 0.196 r_nbd_other 0.191 r_nbtor_refined 0.165 r_symmetry_hbond_refined 0.156 r_symmetry_vdw_other 0.147 r_chiral_restr 0.115 r_nbtor_other 0.091 r_bond_refined_d 0.02 r_gen_planes_refined 0.007 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1024 Nucleic Acid Atoms Solvent Atoms 164 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement CrystalClear data reduction d*TREK data scaling