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The structure of CBM51 from Clostridium perfringens GH95
Crystallization Crystal Properties Matthews coefficient Solvent content 2.46 49.67
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 76.784 α = 90 b = 76.784 β = 90 c = 51.822 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 113 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.5 20 99.8 0.06 13.4 6.5 26520 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.5 1.55 99.9 0.4 3.4 5.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.5 20 26498 1402 99.8 0.15 0.148 0.1559 0.184 0.1905 RANDOM 12.31
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.08 0.04 0.08 -0.12
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.964 r_dihedral_angle_3_deg 11.762 r_dihedral_angle_1_deg 7.08 r_scangle_it 4.967 r_scbond_it 3.919 r_mcangle_it 2.481 r_mcbond_it 1.811 r_angle_refined_deg 1.603 r_angle_other_deg 0.901 r_symmetry_vdw_other 0.328
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.964 r_dihedral_angle_3_deg 11.762 r_dihedral_angle_1_deg 7.08 r_scangle_it 4.967 r_scbond_it 3.919 r_mcangle_it 2.481 r_mcbond_it 1.811 r_angle_refined_deg 1.603 r_angle_other_deg 0.901 r_symmetry_vdw_other 0.328 r_symmetry_hbond_refined 0.288 r_nbd_refined 0.226 r_nbd_other 0.205 r_symmetry_vdw_refined 0.201 r_xyhbond_nbd_refined 0.198 r_nbtor_refined 0.176 r_chiral_restr 0.119 r_nbtor_other 0.09 r_bond_refined_d 0.019 r_gen_planes_refined 0.008 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_dihedral_angle_4_deg r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1116 Nucleic Acid Atoms Solvent Atoms 162 Heterogen Atoms 1
Software Software Software Name Purpose REFMAC refinement MOLREP phasing