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Crystal structures of HIV-1 reverse transcriptase complexes with thiocarbamate non-nucleoside inhibitors
Crystallization Crystal Properties Matthews coefficient Solvent content 3.34 62.84
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 119.944 α = 90 b = 156.996 β = 90 c = 154.42 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON MAX II BEAMLINE I711 MAX II I711
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.8 20 81.1 0.07 2 35517 2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.82 20 27297 1408 81.5 0.259 0.255 0.2543 0.333 0.3346 RANDOM 55.55
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.14 -1.89 3.04
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.942 r_dihedral_angle_3_deg 16.805 r_dihedral_angle_4_deg 15.686 r_dihedral_angle_1_deg 4.976 r_scangle_it 2.556 r_scbond_it 1.727 r_mcangle_it 1.574 r_mcbond_it 0.807 r_angle_refined_deg 0.614 r_symmetry_vdw_refined 0.381
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.942 r_dihedral_angle_3_deg 16.805 r_dihedral_angle_4_deg 15.686 r_dihedral_angle_1_deg 4.976 r_scangle_it 2.556 r_scbond_it 1.727 r_mcangle_it 1.574 r_mcbond_it 0.807 r_angle_refined_deg 0.614 r_symmetry_vdw_refined 0.381 r_nbtor_refined 0.339 r_nbd_refined 0.331 r_symmetry_hbond_refined 0.265 r_xyhbond_nbd_refined 0.241 r_chiral_restr 0.051 r_gen_planes_refined 0.004 r_bond_refined_d 0.003 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7712 Nucleic Acid Atoms Solvent Atoms 46 Heterogen Atoms 24
Software Software Software Name Purpose REFMAC refinement AMoRE phasing