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alkyldihydroxyacetonephosphate synthase in P1
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 12% PEG4K, 200MM LI2SO4, 100MM TRISCL PH=8.5
Crystal Properties Matthews coefficient Solvent content 2.85 56.53
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 77.8 α = 114 b = 98 β = 93 c = 107 γ = 103
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 273 CCD ADSC CCD 2006-06-27 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-1 ESRF ID14-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 48.4 95.3 0.08 12.4 4.6 176351
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.1 89 0.4 3.4 3.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.99 19.98 167473 8878 92.7 0.228 0.226 0.227 0.264 0.2631 RANDOM 29.95
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.14 -0.2 0.03 -0.12 -0.32 -0.37
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.845 r_dihedral_angle_4_deg 19.486 r_dihedral_angle_3_deg 17.077 r_dihedral_angle_1_deg 7.233 r_scangle_it 4.146 r_scbond_it 2.592 r_angle_refined_deg 1.683 r_mcangle_it 1.654 r_mcbond_it 1.026 r_nbtor_refined 0.311
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.845 r_dihedral_angle_4_deg 19.486 r_dihedral_angle_3_deg 17.077 r_dihedral_angle_1_deg 7.233 r_scangle_it 4.146 r_scbond_it 2.592 r_angle_refined_deg 1.683 r_mcangle_it 1.654 r_mcbond_it 1.026 r_nbtor_refined 0.311 r_nbd_refined 0.223 r_symmetry_vdw_refined 0.206 r_xyhbond_nbd_refined 0.179 r_symmetry_hbond_refined 0.14 r_chiral_restr 0.128 r_bond_refined_d 0.02 r_gen_planes_refined 0.008 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 16529 Nucleic Acid Atoms Solvent Atoms 1134 Heterogen Atoms 263
Software Software Software Name Purpose MOSFLM data reduction SCALA data scaling SHELXD phasing SHELXE phasing REFMAC refinement