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Solution structure of the second dsRBD from RNA helicase A
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D 1H-13C NOESY 1.16 mM [U-100% 13C; U-100% 15N] entity-1, 20 mM sodium phosphate-2, 100 mM sodium chloride-3, 1 mM DTT-4, 0.02 % sodium azide-5 90% H2O/10% D2O 120 6.0 ambient 298 2 3D 1H-15N NOESY 1.16 mM [U-100% 13C; U-100% 15N] entity-1, 20 mM sodium phosphate-2, 100 mM sodium chloride-3, 1 mM DTT-4, 0.02 % sodium azide-5 90% H2O/10% D2O 120 6.0 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 800 2 Bruker AVANCE 700 3 Bruker AVANCE 600
NMR Refinement Method Details Software simulated annealing, torsion angle dynamics Amber
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations Conformers Calculated Total Number 200 Conformers Submitted Total Number 20 Representative Model 1 (fewest violations)
Computation: NMR Software # Classification Version Software Name Author 1 refinement Amber Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, Kollm 2 refinement CYANA