2RHJ

Synthetic Gene Encoded Bacillus Subtilis FtsZ with Two Sulfate Ions and Sodium Ion in the Nucleotide Pocket


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION4.529350% PEG 400, 0.1M Acetate, 200mM lithium sulfate, pH 4.5, vapor diffusion, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
2.6253.13

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 74.135α = 90
b = 82.062β = 90
c = 117.507γ = 90
Symmetry
Space GroupC 2 2 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDCUSTOM-MADESINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 19-BM0.97934APS19-BM

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.76150980.07127.46.834949
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.7611.8288.80.6422.14.63101

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.761503492534925175297.570.1810.1810.180.208RANDOM20.977
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
1.41-0.93-0.49
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.3
r_dihedral_angle_4_deg16.507
r_dihedral_angle_3_deg13.647
r_dihedral_angle_1_deg5.662
r_scangle_it5.347
r_scbond_it3.169
r_mcangle_it1.853
r_angle_refined_deg1.529
r_mcbond_it1.025
r_angle_other_deg0.919
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.3
r_dihedral_angle_4_deg16.507
r_dihedral_angle_3_deg13.647
r_dihedral_angle_1_deg5.662
r_scangle_it5.347
r_scbond_it3.169
r_mcangle_it1.853
r_angle_refined_deg1.529
r_mcbond_it1.025
r_angle_other_deg0.919
r_mcbond_other0.299
r_nbd_refined0.229
r_xyhbond_nbd_refined0.227
r_symmetry_vdw_refined0.211
r_symmetry_vdw_other0.199
r_nbd_other0.194
r_metal_ion_refined0.181
r_nbtor_refined0.17
r_symmetry_hbond_refined0.17
r_chiral_restr0.091
r_nbtor_other0.087
r_xyhbond_nbd_other0.084
r_bond_refined_d0.017
r_gen_planes_refined0.006
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2279
Nucleic Acid Atoms
Solvent Atoms172
Heterogen Atoms64

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
MOLREPphasing
REFMACrefinement
PDB_EXTRACTdata extraction
SBC-Collectdata collection
HKL-2000data reduction
HKL-2000data scaling