☰ Navigation Tabs
Crystal Structure of Autoinhibited Form of Grp1 Arf GTPase Exchange Factor
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8.2 277.15 10% PEG 4000, 50 mM Tris, 50 mM LiSO4, pH 8.2, VAPOR DIFFUSION, HANGING DROP, temperature 277.15K
Crystal Properties Matthews coefficient Solvent content 2.8 56.15
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 82.906 α = 90 b = 94.705 β = 90 c = 115.436 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2005-02-12 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X29A 0.9791 NSLS X29A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 20 58263
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.04 20 55392 2964 99.79 0.20962 0.2079 0.24162 0.2413 RANDOM 40.746
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 3.11 -1.99 -1.12
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.65 r_dihedral_angle_4_deg 16.299 r_dihedral_angle_3_deg 12.623 r_dihedral_angle_1_deg 5.003 r_scangle_it 2.186 r_scbond_it 1.401 r_angle_refined_deg 1.084 r_mcangle_it 1.012 r_mcbond_it 0.611 r_nbtor_refined 0.298
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.65 r_dihedral_angle_4_deg 16.299 r_dihedral_angle_3_deg 12.623 r_dihedral_angle_1_deg 5.003 r_scangle_it 2.186 r_scbond_it 1.401 r_angle_refined_deg 1.084 r_mcangle_it 1.012 r_mcbond_it 0.611 r_nbtor_refined 0.298 r_nbd_refined 0.18 r_symmetry_hbond_refined 0.178 r_symmetry_vdw_refined 0.159 r_xyhbond_nbd_refined 0.134 r_chiral_restr 0.071 r_bond_refined_d 0.008 r_gen_planes_refined 0.003 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5599 Nucleic Acid Atoms Solvent Atoms 535 Heterogen Atoms 97
Software Software Software Name Purpose REFMAC refinement HKL-2000 data collection DENZO data reduction SCALEPACK data scaling PHASER phasing