☰ Navigation Tabs
Carboxysome Subunit, CcmL
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 298 0.1M bis-Tris, 20% PEG3350, 0.3M NaCl, pH 6.5, vapor diffusion, hanging drop, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.08 40.92
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 64.428 α = 90 b = 107.444 β = 96.51 c = 72.264 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2006-09-14 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.2.2 0.97944, 0.979617, 0.975593 ALS 8.2.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.4 90 98 0.129 6.4 3.3 52537 52537 -3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.4 19.9 30053 1511 78.92 0.243 0.24 0.2428 0.296 0.2997 RANDOM 22.143
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.03 -0.02 0.03 -0.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.342 r_dihedral_angle_3_deg 18.684 r_dihedral_angle_4_deg 14.569 r_scangle_it 4.945 r_dihedral_angle_1_deg 4.014 r_scbond_it 3.756 r_mcangle_it 3.532 r_mcbond_it 2.713 r_angle_refined_deg 2.404 r_angle_other_deg 2.353
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.342 r_dihedral_angle_3_deg 18.684 r_dihedral_angle_4_deg 14.569 r_scangle_it 4.945 r_dihedral_angle_1_deg 4.014 r_scbond_it 3.756 r_mcangle_it 3.532 r_mcbond_it 2.713 r_angle_refined_deg 2.404 r_angle_other_deg 2.353 r_symmetry_vdw_refined 0.287 r_symmetry_hbond_refined 0.286 r_symmetry_vdw_other 0.283 r_xyhbond_nbd_refined 0.262 r_mcbond_other 0.244 r_nbd_other 0.243 r_nbd_refined 0.224 r_nbtor_refined 0.18 r_chiral_restr 0.136 r_xyhbond_nbd_other 0.119 r_nbtor_other 0.107 r_bond_refined_d 0.018 r_gen_planes_refined 0.007 r_bond_other_d 0.005 r_gen_planes_other 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7155 Nucleic Acid Atoms Solvent Atoms 90 Heterogen Atoms 24
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction