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Crystal structure of ferritin like, diiron-carboxylate proteins from Bacillus anthracis str. Ames
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 289 0.5 M Lithium sulfate, 2 % PEG 8000, VAPOR DIFFUSION, SITTING DROP, temperature 289K
Crystal Properties Matthews coefficient Solvent content 2.45 49.74
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 100.225 α = 90 b = 100.225 β = 90 c = 100.225 γ = 90
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 MIRRORS 2007-07-03 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 31.69 99.7 0.086 15.2 39.6 11458
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.07 100 0.439 11.9 32.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2 31.69 10304 10304 1125 99.5 0.202 0.197 0.1968 0.245 0.248 RANDOM 33.75
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.263 r_dihedral_angle_4_deg 21.794 r_dihedral_angle_3_deg 17.262 r_dihedral_angle_1_deg 5.136 r_scangle_it 4.944 r_scbond_it 3.201 r_mcangle_it 1.648 r_angle_refined_deg 1.421 r_mcbond_it 1.226 r_nbtor_refined 0.303
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.263 r_dihedral_angle_4_deg 21.794 r_dihedral_angle_3_deg 17.262 r_dihedral_angle_1_deg 5.136 r_scangle_it 4.944 r_scbond_it 3.201 r_mcangle_it 1.648 r_angle_refined_deg 1.421 r_mcbond_it 1.226 r_nbtor_refined 0.303 r_symmetry_vdw_refined 0.254 r_nbd_refined 0.217 r_xyhbond_nbd_refined 0.175 r_symmetry_hbond_refined 0.11 r_chiral_restr 0.096 r_bond_refined_d 0.019 r_gen_planes_refined 0.006 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1122 Nucleic Acid Atoms Solvent Atoms 128 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement HKL-3000 data reduction HKL-3000 data scaling HKL-3000 phasing SHELXCD phasing SHELXE model building MLPHARE phasing RESOLVE phasing