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FutA1 Synechocystis PCC 6803
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1Y9U 1Y9U Bordetella ferric binding protein
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 batch seeding 5 298 100mM succinate, 2.2-2.8 ammonium sulfate, 5% iso-propanol, pH 5.0, batch seeding, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.25 45.27
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 59.17 α = 90 b = 60.68 β = 90 c = 91.7 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 298 CCD BRUKER SMART 6000 2005-01-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE OTHER 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 50 96.1 0.066 19.6 3.4 21638 21638
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.02 81.3 0.093 5.1 1.7 394
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1Y9U Bordetella ferric binding protein 2 50 21638 21638 2154 94.3 0.184 0.184 0.184 0.1865 0.228 0.2305 random 17.754
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.826 0.477 -1.303
RMS Deviations Key Refinement Restraint Deviation c_scangle_it 3.612 c_scbond_it 2.378 c_mcangle_it 1.893 c_mcbond_it 1.294 c_angle_d 1.108 c_bond_d 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2465 Nucleic Acid Atoms Solvent Atoms 157 Heterogen Atoms 15
Software Software Software Name Purpose CNS refinement PDB_EXTRACT data extraction PROTEUM PLUS data collection SAINT data reduction SCALA data scaling AMoRE phasing