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Crystal structure of aromatic amine dehydrogenase TTQ-formamide adduct oxidized with ferricyanide.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6 292 PEG 2000 MME, AMMONIUM SULPHATE,SODIUM CACODYLATE, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 292K
Crystal Properties Matthews coefficient Solvent content 2.32 46.89
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 70.338 α = 90 b = 89.266 β = 90.59 c = 80.494 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-1 ESRF ID14-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.45 161574
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 1.45 15 161574 8526 100 0.16242 0.16086 0.1701 0.19172 0.1986 RANDOM 15.166
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.85 -0.87 -0.15 0.98
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.873 r_dihedral_angle_4_deg 11.516 r_dihedral_angle_3_deg 11.323 r_dihedral_angle_1_deg 7.089 r_scangle_it 5.207 r_scbond_it 3.655 r_mcangle_it 2.498 r_mcbond_it 1.964 r_angle_refined_deg 1.542 r_angle_other_deg 0.834
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.873 r_dihedral_angle_4_deg 11.516 r_dihedral_angle_3_deg 11.323 r_dihedral_angle_1_deg 7.089 r_scangle_it 5.207 r_scbond_it 3.655 r_mcangle_it 2.498 r_mcbond_it 1.964 r_angle_refined_deg 1.542 r_angle_other_deg 0.834 r_mcbond_other 0.701 r_symmetry_vdw_refined 0.282 r_symmetry_vdw_other 0.24 r_nbd_refined 0.206 r_nbd_other 0.196 r_nbtor_refined 0.18 r_xyhbond_nbd_refined 0.164 r_symmetry_hbond_refined 0.154 r_chiral_restr 0.097 r_nbtor_other 0.09 r_bond_refined_d 0.013 r_bond_other_d 0.001 r_gen_planes_refined 0.001 r_gen_planes_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7377 Nucleic Acid Atoms Solvent Atoms 1685 Heterogen Atoms 16
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction CCP4 data scaling