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Crystal structure of aromatic amine dehydrogenase TTQ-phenylacetaldehyde adduct oxidized with ferricyanide
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6 292 PEG 2000 MME, AMMONIUM SULPHATE,
SODIUM CACODYLATE, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 292K
Crystal Properties Matthews coefficient Solvent content 2.34 47.4
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 70.807 α = 90 b = 88.957 β = 90.31 c = 81.016 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-1 ESRF ID14-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.45 15 142062 142062
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 1.45 15 142062 7488 100 0.15573 0.15407 0.1622 0.18769 0.1926 RANDOM 15.362
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.25 -0.95 -0.75 0.99
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.539 r_dihedral_angle_4_deg 12.77 r_dihedral_angle_3_deg 11.79 r_dihedral_angle_1_deg 7.528 r_sphericity_free 6.068 r_scangle_it 3.029 r_sphericity_bonded 2.961 r_scbond_it 2.338 r_mcangle_it 1.538 r_mcbond_it 1.271
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.539 r_dihedral_angle_4_deg 12.77 r_dihedral_angle_3_deg 11.79 r_dihedral_angle_1_deg 7.528 r_sphericity_free 6.068 r_scangle_it 3.029 r_sphericity_bonded 2.961 r_scbond_it 2.338 r_mcangle_it 1.538 r_mcbond_it 1.271 r_rigid_bond_restr 1.151 r_angle_refined_deg 1.099 r_angle_other_deg 0.755 r_mcbond_other 0.527 r_symmetry_vdw_other 0.225 r_symmetry_vdw_refined 0.207 r_nbd_other 0.204 r_nbd_refined 0.199 r_symmetry_hbond_refined 0.19 r_nbtor_refined 0.177 r_xyhbond_nbd_refined 0.129 r_nbtor_other 0.099 r_chiral_restr 0.092 r_bond_refined_d 0.012 r_bond_other_d 0.002 r_gen_planes_refined 0.002 r_gen_planes_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7373 Nucleic Acid Atoms Solvent Atoms 1051 Heterogen Atoms 18
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction CCP4 data scaling