2NWT
NMR Structure of Protein UPF0165 protein AF_2212 from Archaeoglobus Fulgidus; Northeast Structural Genomics Consortium Target GR83
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 4,3D, GFT HNNCABCA | 1.2 mM protein Y2212_ARCFU, U-15N,13C, 5mM CaCl, 100mM NaCl, 20mM NH4OAc, 10mM DTT, 0.02%NaN3 | 5% D2O, 95% H2O | 100 mM NaCl | 5.5 | ambient | 298 | |
2 | 4,3D, GFT CABCACoNNH | 1.2 mM protein Y2212_ARCFU, U-15N,13C, 5mM CaCl, 100mM NaCl, 20mM NH4OAc, 10mM DTT, 0.02%NaN3 | 5% D2O, 95% H2O | 100 mM NaCl | 5.5 | ambient | 298 | |
3 | 4,3D, GFT HCCH COSY | 1.2 mM protein Y2212_ARCFU, U-15N,13C, 5mM CaCl, 100mM NaCl, 20mM NH4OAc, 10mM DTT, 0.02%NaN3 | 5% D2O, 95% H2O | 100 mM NaCl | 5.5 | ambient | 298 | |
4 | 3D, 15N-13C resolved simultanious NOESY | 1.2 mM protein Y2212_ARCFU, U-15N,13C, 5mM CaCl, 100mM NaCl, 20mM NH4OAc, 10mM DTT, 0.02%NaN3 | 5% D2O, 95% H2O | 100 mM NaCl | 5.5 | ambient | 298 | |
5 | 3D, 15N, 13C resolved X-filtered NOESY | 1.2 mM protein Y2212_ARCFU, U-15N,13C, 5mM CaCl, 100mM NaCl, 20mM NH4OAc, 10mM DTT, 0.02%NaN3 | 5% D2O, 95% H2O | 100 mM NaCl | 5.5 | ambient | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 750 |
2 | Varian | INOVA | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing molecular dynamics | NMRPipe |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 20 (lowest energy) |
Additional NMR Experimental Information | |
---|---|
Details | This Structure was determined using recently developed High Throughput NMR structure determination protocol. |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | processing | NMRPipe | 2.3 | Delaglio et al |
2 | data analysis | DYANA | 1.5 | Guntert et al |
3 | refinement | CYANA | 2.1 | Guntert et al |
4 | refinement | CNS | 1.1 | Brunget et al |