SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H NOESY1 mM DNA (5'-D(*CP*TP*AP*GP*CP*GP*GP*TP*CP*AP*TP*C)-3'), 1 mM DNA (5'-D(*GP*AP*TP*GP*AP*CP*(GL6)P*GP*CP*TP*AP*G)-3')90% H2O/10% D2OPotassium phosphate7ambient279.6
22D 1H-1H NOESY1 mM DNA (5'-D(*CP*TP*AP*GP*CP*GP*GP*TP*CP*AP*TP*C)-3'), 1 mM DNA (5'-D(*GP*AP*TP*GP*AP*CP*(GL6)P*GP*CP*TP*AP*G)-3')90% H2O/10% D2OPotassium phosphate7ambient279.6
32D 1H-1H TOCSY1 mM DNA (5'-D(*CP*TP*AP*GP*CP*GP*GP*TP*CP*AP*TP*C)-3'), 1 mM DNA (5'-D(*GP*AP*TP*GP*AP*CP*(GL6)P*GP*CP*TP*AP*G)-3')90% H2O/10% D2OPotassium phosphate7ambient279.6
42D 1H-1H COSY1 mM DNA (5'-D(*CP*TP*AP*GP*CP*GP*GP*TP*CP*AP*TP*C)-3'), 1 mM DNA (5'-D(*GP*AP*TP*GP*AP*CP*(GL6)P*GP*CP*TP*AP*G)-3')90% H2O/10% D2OPotassium phosphate7ambient279.6
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE600
2BrukerAVANCE800
NMR Refinement
MethodDetailsSoftware
molecular dynamicsAmber
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number10
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Additional NMR Experimental Information
DetailsThe structure was determined using NOE data
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementAmberCase, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, and Kollman
2chemical shift assignmentAmberCase, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, and Kollman
3processingAmberCase, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, and Kollman
4refinementAmberGoddard
5chemical shift assignmentAmberGoddard
6processingAmberGoddard
7refinementAmberBruker Biospin
8chemical shift assignmentAmberBruker Biospin
9processingAmberBruker Biospin