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Solution structure of the SLURP-2, a secreted isoform of Lynx1
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.5 mM [U-99% 13C; U-99% 15N] SLURP 95% H2O/5% D2O/5% dioxane-d6 10 5.0 ambient 315 2 2D 1H-13C HSQC 0.5 mM [U-99% 13C; U-99% 15N] SLURP 95% H2O/5% D2O/5% dioxane-d6 10 5.0 ambient 315 3 3D HNCO 0.5 mM [U-99% 13C; U-99% 15N] SLURP 95% H2O/5% D2O/5% dioxane-d6 10 5.0 ambient 315 4 3D HNCA 0.5 mM [U-99% 13C; U-99% 15N] SLURP 95% H2O/5% D2O/5% dioxane-d6 10 5.0 ambient 315 5 3D HNCACB 0.5 mM [U-99% 13C; U-99% 15N] SLURP 95% H2O/5% D2O/5% dioxane-d6 10 5.0 ambient 315 6 3D HN(CO)CA 0.5 mM [U-99% 13C; U-99% 15N] SLURP 95% H2O/5% D2O/5% dioxane-d6 10 5.0 ambient 315 7 3D HCCH-TOCSY 0.5 mM [U-99% 13C; U-99% 15N] SLURP 95% H2O/5% D2O/5% dioxane-d6 10 5.0 ambient 315 8 3D HNHA 0.5 mM [U-99% 13C; U-99% 15N] SLURP 95% H2O/5% D2O/5% dioxane-d6 10 5.0 ambient 315 9 3D 1H-15N NOESY 0.5 mM [U-99% 13C; U-99% 15N] SLURP 95% H2O/5% D2O/5% dioxane-d6 10 5.0 ambient 315 10 3D 1H-13C NOESY aliphatic 0.5 mM [U-99% 13C; U-99% 15N] SLURP 95% H2O/5% D2O/5% dioxane-d6 10 5.0 ambient 315 11 3D 1H-15N TOCSY 0.5 mM [U-99% 13C; U-99% 15N] SLURP 95% H2O/5% D2O/5% dioxane-d6 10 5.0 ambient 315 12 3D HNHB 0.5 mM [U-99% 13C; U-99% 15N] SLURP 95% H2O/5% D2O/5% dioxane-d6 10 5.0 ambient 315
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 800
NMR Refinement Method Details Software simulated annealing NMRPipe
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 500 Conformers Submitted Total Number 20 Representative Model 1 (fewest violations)
Computation: NMR Software # Classification Version Software Name Author 1 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 2 collection TopSpin Bruker Biospin 3 processing TopSpin Bruker Biospin 4 peak picking CARA Keller and Wuthrich 5 chemical shift assignment CARA Keller and Wuthrich 6 structure solution CYANA Guntert, Mumenthaler and Wuthrich 7 refinement CYANA Guntert, Mumenthaler and Wuthrich