2N7Z
Solution structure of RIP2 CARD
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 0.8 mM [U-99% 13C; U-99% 15N] CARD-1, 50 mM [U-98% 2H] DTT-2 | 90% H2O/10% D2O | ambient | 301 | |||
2 | 2D 1H-13C HSQC aromatic | 0.8 mM [U-99% 13C; U-99% 15N] CARD-1, 50 mM [U-98% 2H] DTT-2 | 90% H2O/10% D2O | ambient | 301 | |||
3 | 2D 1H-13C HSQC aliphatic | 0.8 mM [U-99% 13C; U-99% 15N] CARD-1, 50 mM [U-98% 2H] DTT-2 | 90% H2O/10% D2O | ambient | 301 | |||
4 | 3D HNCA | 0.8 mM [U-99% 13C; U-99% 15N] CARD-1, 50 mM [U-98% 2H] DTT-2 | 90% H2O/10% D2O | ambient | 301 | |||
5 | 3D HN(CO)CA | 0.8 mM [U-99% 13C; U-99% 15N] CARD-1, 50 mM [U-98% 2H] DTT-2 | 90% H2O/10% D2O | ambient | 301 | |||
6 | 3D HCCH-TOCSY | 0.8 mM [U-99% 13C; U-99% 15N] CARD-1, 50 mM [U-98% 2H] DTT-2 | 90% H2O/10% D2O | ambient | 301 | |||
7 | 4D 13C, 15N-edited NOESY | 0.8 mM [U-99% 13C; U-99% 15N] CARD-1, 50 mM [U-98% 2H] DTT-2 | 90% H2O/10% D2O | ambient | 301 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 800 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
torsion angle dynamics, molecular dynamics | NMRView |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | target function |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | data analysis | NMRView | Johnson, One Moon Scientific | |
2 | structure solution | CYANA | Guntert, Mumenthaler and Wuthrich | |
3 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
4 | refinement | Amber | Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollman | |
5 | refinement | CYANA |