2N7Y
NMR structure of metal-binding domain 1 of ATP7B
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 50 mM HEPES, 0.5 mM DSS, 5 mM TCEP | 90% H2O/10% D2O | 50 | 7.4 | ambient | 298 | |
2 | 3D HNCO | 50 mM HEPES, 0.5 mM DSS, 5 mM TCEP | 90% H2O/10% D2O | 50 | 7.4 | ambient | 298 | |
3 | 3D HNCA | 50 mM HEPES, 0.5 mM DSS, 5 mM TCEP | 90% H2O/10% D2O | 50 | 7.4 | ambient | 298 | |
4 | 3D HNCACB | 50 mM HEPES, 0.5 mM DSS, 5 mM TCEP | 90% H2O/10% D2O | 50 | 7.4 | ambient | 298 | |
5 | 3D HN(COCA)CB | 50 mM HEPES, 0.5 mM DSS, 5 mM TCEP | 90% H2O/10% D2O | 50 | 7.4 | ambient | 298 | |
6 | 3D HN(CA)CO | 50 mM HEPES, 0.5 mM DSS, 5 mM TCEP | 90% H2O/10% D2O | 50 | 7.4 | ambient | 298 | |
7 | 3D C(CO)NH | 50 mM HEPES, 0.5 mM DSS, 5 mM TCEP | 90% H2O/10% D2O | 50 | 7.4 | ambient | 298 | |
8 | 3D H(CCO)NH | 50 mM HEPES, 0.5 mM DSS, 5 mM TCEP | 90% H2O/10% D2O | 50 | 7.4 | ambient | 298 | |
9 | 3D 1H-15N TOCSY | 50 mM HEPES, 0.5 mM DSS, 5 mM TCEP | 90% H2O/10% D2O | 50 | 7.4 | ambient | 298 | |
10 | 3D 1H-15N NOESY | 50 mM HEPES, 0.5 mM DSS, 5 mM TCEP | 90% H2O/10% D2O | 50 | 7.4 | ambient | 298 | |
11 | 3D 1H-13C NOESY | 50 mM HEPES, 0.5 mM DSS, 5 mM TCEP | 90% H2O/10% D2O | 50 | 7.4 | ambient | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 750 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | EXPLICIT WATER REFINEMENT | NMRPipe |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (closest to the average) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
2 | chemical shift assignment | CARA | Keller and Wuthrich | |
3 | peak picking | PONDEROSA-C/S | Lee and Markley | |
4 | structure solution | PONDEROSA-C/S | Lee and Markley | |
5 | refinement | PONDEROSA-C/S | Lee and Markley |