Experiment: 2N40

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	50 mM MES, 0.02 % NaN3, 0.5 mM [U-100% 13C; U-100% 15N] Link-TSG, 0.6 mM CHONDROITIN 4-SULFATE HEXASACCHARIDE	90% H2O/10% D2O		6	ambient	298
2	3D CBCA(CO)NH	50 mM MES, 0.02 % NaN3, 0.5 mM [U-100% 13C; U-100% 15N] Link-TSG, 0.6 mM CHONDROITIN 4-SULFATE HEXASACCHARIDE	90% H2O/10% D2O		6	ambient	298
3	3D HNCO	50 mM MES, 0.02 % NaN3, 0.5 mM [U-100% 13C; U-100% 15N] Link-TSG, 0.6 mM CHONDROITIN 4-SULFATE HEXASACCHARIDE	90% H2O/10% D2O		6	ambient	298
4	3D HNCACB	50 mM MES, 0.02 % NaN3, 0.5 mM [U-100% 13C; U-100% 15N] Link-TSG, 0.6 mM CHONDROITIN 4-SULFATE HEXASACCHARIDE	90% H2O/10% D2O		6	ambient	298
5	3D HCCH-TOCSY	50 mM MES, 0.02 % NaN3, 0.5 mM [U-100% 13C; U-100% 15N] Link-TSG, 0.6 mM CHONDROITIN 4-SULFATE HEXASACCHARIDE	90% H2O/10% D2O		6	ambient	298
6	3D 1H-15N NOESY	50 mM MES, 0.02 % NaN3, 0.5 mM [U-100% 13C; U-100% 15N] Link-TSG, 0.6 mM CHONDROITIN 4-SULFATE HEXASACCHARIDE	90% H2O/10% D2O		6	ambient	298
7	3D 1H-13C NOESY	50 mM MES, 0.02 % NaN3, 0.5 mM [U-100% 13C; U-100% 15N] Link-TSG, 0.6 mM CHONDROITIN 4-SULFATE HEXASACCHARIDE	90% H2O/10% D2O		6	ambient	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Varian	INOVA	600
2	Varian	INOVA	800
3	Varian	INOVA	900

NMR Refinement
Method	Details	Software
simulated annealing		X-PLOR NIH

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	50
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	refinement	X-PLOR NIH	2.8	Schwieters, Kuszewski, Tjandra and Clore
2	structure solution	X-PLOR NIH	2.8	Schwieters, Kuszewski, Tjandra and Clore
3	refinement	CYANA	3.0	Guntert, Mumenthaler and Wuthrich
4	structure solution	CYANA	3.0	Guntert, Mumenthaler and Wuthrich
5	peak picking	Sparky		Goddard
6	chemical shift assignment	Sparky		Goddard
7	processing	NMRDraw		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
8	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

2N40 | pdb_00002n40