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Solution structure of DRB4 dsRBD2 (viz. DRB4(81-151))
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 500 uM [U-100% 15N] DRB4(81-151) 90% H2O/10% D2O 0.15 7.2 ambient 298 2 3D HNCA 500 uM [U-100% 13C; U-100% 15N] DRB4(81-151) 90% H2O/10% D2O 0.15 7.2 ambient 298 3 3D HNCACB 500 uM [U-100% 13C; U-100% 15N] DRB4(81-151) 90% H2O/10% D2O 0.15 7.2 ambient 298 4 3D H(CCO)NH-TOCSY 500 uM [U-100% 13C; U-100% 15N] DRB4(81-151) 90% H2O/10% D2O 0.15 7.2 ambient 298 5 3D (H)C(CO)NH-TOCSY 500 uM [U-100% 13C; U-100% 15N] DRB4(81-151) 90% H2O/10% D2O 0.15 7.2 ambient 298 6 3D 1H-15N NOESY 500 uM [U-100% 15N] DRB4(81-151) 90% H2O/10% D2O 0.15 7.2 ambient 298 7 3D 1H-13C NOESY 500 uM [U-100% 13C; U-100% 15N] DRB4(81-151) 90% H2O/10% D2O 0.15 7.2 ambient 298 8 2D 1H-13C HSQC 500 uM [U-100% 13C; U-100% 15N] DRB4(81-151) 90% H2O/10% D2O 0.15 7.2 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600
NMR Refinement Method Details Software simulated annealing TopSpin
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 collection TopSpin 2.1.6 Bruker Biospin 2 processing TopSpin 2.1.6 Bruker Biospin 3 chemical shift assignment CARA 1.8.4 Keller and Wuthrich 4 data analysis CARA 1.8.4 Keller and Wuthrich 5 peak picking CARA 1.8.4 Keller and Wuthrich 6 data analysis Sparky Goddard 7 structure solution Sparky Goddard 8 data analysis Sparky Schwieters, Kuszewski, Tjandra and Clore 9 structure solution Sparky Schwieters, Kuszewski, Tjandra and Clore 10 data analysis Sparky Goddard 11 structure solution Sparky Goddard 12 data analysis Sparky Schwieters, Kuszewski, Tjandra and Clore 13 structure solution Sparky Schwieters, Kuszewski, Tjandra and Clore 14 structure validation ProcheckNMR 3.5.4 Laskowski and MacArthur 15 refinement X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore